TSSAR: Transcription Start Site Annotation Regime Web Service

Overview

The TSSAR Web Service consists of three major parts which gear into each other. The first step in a TSSAR analysis of dRNA-seq data is pre-processing with the platform-independent TSSAR Client. This program extracts the relevant information from your mapped sequencing reads and transmits them to the TSSAR Server. The Web Server then applies the appropriate analysis steps, among them the TSSAR Statistical Model, to your data. Eventually, you will be notified by email (if an email address has been supplied during data submission) once the computation is finished.

Below, please find for each of the steps a short introduction how to use it. You might want to start with TSSAR Java Client. For a quick start please visit the TSSAR Workflow page.

Schematic representation of the three major TSSAR components: The TSSAR Client is used for pre-processing mapped dRNA-seq data locally and transmitting the needed information to the TSSAR Web Server. All computational steps are performed there, based on the TSSAR Statistics.